ATHENA - Analysis of Tumor Heterogeneity in Spatial Omics MeasurementsΒΆ

ATHENA is an open-source computational framework written in Python that facilitates the visualization, processing and analysis of (spatial) heterogeneity from spatial omics data. ATHENA supports any spatially resolved dataset that contains spatial transcriptomic or proteomic measurements, including Imaging Mass Cytometry (IMC), Multiplexed Ion Beam Imaging (MIBI), multiplexed Immunohistochemisty (mIHC) or Immunofluorescence (mIF), seqFISH, MERFISH, Visium.

Note

Start by reading the Quickstart tutorial.

General