Installation

Package Installation

conda create -y -n scquest python=3.8
conda activate scquest
pip install "git+https://github.com/AI4SCR/scQUEST.git@master"

Miniconda Installation

mkdir tmp && cd tmp
# download installation script
curl -O https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
chmod u+x Miniconda3-latest-Linux-x86_64.sh;
bash Miniconda3-latest-Linux-x86_64.sh -b;
# clean up
cd .. && rm -r tmp
# set up shell
~/miniconda3/bin/conda init bash
source .bashrc